Plant Ecology Journal Club, 分享主题和文献列表 825, 2019年春

百度云盘文件命名格式举例 “PEJC_8_liulele_Taiwania_20190104.ppt”

文献百度网盘：链接: https://pan.baidu.com/s/1eVoecu7ab6SaTxu2to5upw 提取码: 7br5 

幻灯片百度网盘：链接: https://pan.baidu.com/s/1XkrpC7ZrMZaahMqIixBI_Q 提取码: cswu 

第八期，2019年1月4日19:00，N2-146

SDU, Plant Ecology Journal Club. January 4, 2019 (Session 8th)

1.Liu Lele: The Contribution of Neutral and Environmentally Dependent Processes in Driving Population and Lineage Divergence in Taiwania (Taiwania cryptomerioides)

 　　Li YS, Chang CT, Wang CN, Thomas P, Chung JD, Hwang SY. The Contribution of Neutral and Environmentally Dependent Processes in Driving Population and Lineage Divergence in Taiwania (Taiwania cryptomerioides). Frontiers in plant science. 2018;9.

2.Song Huijia:Biological Flora of the British Isles: Phragmites australis

　　Packer JG, Meyerson LA, Skálová H, Pyšek P, Kueffer C. Biological flora of the British isles: Phragmites australis. Journal of Ecology. 2017 Jul;105(4):1123-62.

3.Wang Jingwen: Genetic and epigenetic differences  in two salt marsh perennials

　　Foust CM, Preite V, Schrey AW, Alvarez M, Robertson MH, Verhoeven KJ, Richards CL. Genetic and epigenetic differences associated with environmental gradients in replicate populations of two salt marsh perennials. Molecular Ecology. 2016 Apr;25(8):1639-52.

4.Yin Meiqi: 基础知识：叶片的结构

第九期，2019年1月11日19:00，N2-146

SDU, Plant Ecology Journal Club. January 11, 2019 (Session 9th)

1. Liu Lele:  Barbour MA, Erlandson S, Peay K, Locke B, Jules ES, Crutsinger GM. Trait plasticity is more important than genetic variation in determining species richness of associated communities. Journal of Ecology. 2019 Jan;107(1):350-60.

2.wang Jingwen: Závada T, Malik RJ, Kesseli RV. Population structure in chicory (Cichorium intybus): A successful US weed since the American revolutionary war. Ecology and evolution. 2017 Jun;7(12):4209-19.

3.Yin Meiqi: Pyšek P, Skálová H, Čuda J, Guo WY, Suda J, Doležal J, Kauzál O, Lambertini C, Lučanová M, Mandáková T, Moravcová L. Small genome separates native and invasive populations in an ecologically important cosmopolitan grass. Ecology. 2018 Jan 1;99(1):79-90.

第十期，2018年1月19日19:00，N2-146

SDU, Plant Ecology Journal Club. January 19, 2018 (Session 10th)

1.Wang Jingwen：The emergence of the hyperinvasive vine, Mikania micrantha (Asteraceae), via admixture and founder events inferred from population transcriptomics

2.Liu Lele： Evolution of DNA Methylation in Nasonia

Park J, Peng Z, Zeng J, Elango N, Park T, Wheeler D, Werren JH, Yi SV. Comparative analyses of DNA methylation and sequence evolution using Nasonia genomes. Molecular biology and evolution. 2011 Jun 20;28(12):3345-54.

Wang X, Wheeler D, Avery A, Rago A, Choi JH, Colbourne JK, Clark AG, Werren JH. Function and evolution of DNA methylation in Nasonia vitripennis. PLoS genetics. 2013 Oct 10;9(10):e1003872.

第十一期 ，2019年3月15日19:00, N2-146

SDU, Plant Ecology Journal Club. March 15, 2019 (Session 11th)

2019年分子生态学小组安排Researc Planning of Molecular Ecology in 2019

第十二期 ，2019年3月22日19:00, N2-146

SDU, Plant Ecology Journal Club. March 22, 2019 (Session 12th)

1.Liu Lele:  Epigenetic consequences of interploidal hybridisation in synthetic and natural interspecific potato hybrids

    Cara, Nicolás, Marfil C F , Masuelli R W . Epigenetic patterns newly established after interspecific hybridization in natural populations of Solanum[J]. Ecology & Evolution, 2013, 3(11):3764-3779.

    Nicolás Cara, María Soledad Ferrer, Masuelli R W , et al. Epigenetic consequences of interploidal hybridisation in synthetic and natural interspecific potato hybrids[J]. New Phytologist, 2019.

2.Wang Jingwen: Shi W, Chen X, Gao L, et al. Transient stability of epigenetic population differentiation in a clonal invader[J]. Frontiers in Plant Science, 2018, 9.

3.Yin Meiqi：

第十三期 ，2019年3月29日19:00, N2-146

SDU, Plant Ecology Journal Club. March 28, 2019 (Session 13th)

1. Liu Lele: Hu Y N, Zhao L, Buggs R J A, et al. Population structure of Betula albosinensis and Betula platyphylla: evidence for hybridization and a cryptic lineage[J]. Annals of Botany, 2019, 20: 1-11.

2.Wang Jingwen: 

Macaya‐Sanz D, Heuertz M, López‐de‐Heredia U, et al. The Atlantic–Mediterranean watershed, river basins and glacial history shape the genetic structure of Iberian poplars[J]. Molecular Ecology, 2012, 21(14): 3593-3609. 

第十四期 ，2019年4月4日19:00, N2-146

SDU, Plant Ecology Journal Club. April 4, 2019 (Session 14th)

1.Liu Lele: Effect of Repetitive Sequences on Haplotype Inferences and Parsimony Network

    Saltonstall K . Cryptic invasion by a non-native genotype of the common reed, Phragmites australis, into North America[J]. Proc Natl Acad Sci USA, 2002, 99.
    Vachon N , Freeland J R . Phylogeographic inferences from chloroplast DNA: quantifying the effects of mutations in repetitive and non-repetitive sequences[J]. Molecular Ecology Resources, 2011, 11(2):279-285.
    Saltonstall K , Lambertini C . The value of repetitive sequences in chloroplast DNA for phylogeographic inference: A comment on Vachon & Freeland 2011[J]. Molecular Ecology Resources, 2012, 12(4).
    Freeland J , Vachon N . Repetitive sequences in phylogeographic inference: a reply to Saltonstall and Lambertini (2012)[J]. Molecular Ecology Resources, 2012, 12(4).
    Saltonstall K. The naming of Phragmites haplotypes[J]. Biological Invasions, 2016, 18(9):2433-2441.

2.Wang Jingwen: Torokeldiev N , Ziehe M , Gailing O , et al. Genetic diversity and structure of natural Juglans regia L. populations in the southern Kyrgyz Republic revealed by nuclear SSR and EST-SSR markers[J]. Tree Genetics & Genomes, 2019, 15(1).

3.Zhu Pengcheng: Zhao Y , Lu Q , Wei Y , et al. Effect of actinobacteria agent inoculation methods on cellulose degradation during composting based on redundancy analysis[J]. Bioresource Technology, 2016, 219:196-203.

第十五期 ，2019年4月12日19:00, N2-146

SDU, Plant Ecology Journal Club. April 12, 2019 (Session 15th)

1. Liu Lele: Identification of natural hybrids in Korean Phragmites using haplotype and genotype analyses

Chu H, Cho W K, Jo Y, et al. Identification of natural hybrids in Korean Phragmites using haplotype and genotype analyses[J]. Plant Systematics & Evolution, 2011, 293(1-4):247-253.

2. Wang Jingwen: Low genetic variation is associated with low mutation rate in the giant duckweed

第十六期 ，2019年4月19日19:00, N2-146

SDU, Plant Ecology Journal Club. April 19, 2019 (Session 16th)

1. Wang Jingwen: Evolution during population spread affects plant performance in stressful environments

2. Liu Lele: Reduced-representation bisulfite sequencing finds novel epigenome-wide response to oil pollution in the foundation plant Spartina alterniflora

Alvarez, Mariano* & Robertson, Marta* & Gurp, Thomas & Wagemaker, Cornelis & Giraud, Delphine & Ainouche, Malika & Salmon, Armel & Verhoeven, K.J.F. & Richards, Christina. (2018). Reduced-representation bisulfite sequencing finds novel epigenome-wide response to oil pollution in the foundation plant Spartina alterniflora. 10.1101/426569.

C. M. Foust , V. Preite,  A. W. Schrey,  M. Alvarez,  M. H. Robertson,  K. J. F. Verhoeven,  C. L. Richards. Genetic and epigenetic differences associated with environmental gradients in replicate populations of two salt marsh perennials[J]. Molecular Ecology, 2016, 25(8):1639-1652. (Cited by: 37)

Marta Robertson, Aaron Schrey,  Ashley Shayter,  Christina J Moss,  Christina Richards. Genetic and epigenetic variation in Spartina alterniflora following the Deepwater Horizon oil spill[J]. Evolutionary Applications, 2017, 10(8):792. ( Cited by: 8)

Mariano Alvarez, Julie Ferreira de Carvalho,  Armel Salmon,  Malika L. Ainouche,  Armand Cavé‐Radet Abdelhak El Amrani,  Tammy E. Foster,  Sydney Moyer,  Christina L. Richards. Transcriptome response of the foundation plant Spartina alterniflora to the Deepwater Horizon oil spill. Molecular Ecology. 2018; 27: 2986– 3000. (Cited by: 1)

第十七期 ，2019年4月26日19:00, N2-146

SDU, Plant Ecology Journal Club. April 26, 2019 (Session 17th)

1. Wang Jingwen: Genetic diversity and relationship between domesticated rye and its wild relatives as revealed through genotyping-by-sequencing

2. Liu Lele：Soil microbial community in Yellow River Delta

Yu Y, Wang H, Liu J, Wang Q, Shen T, Guo W, Wang R. Shifts in microbial community function and structure along the successional gradient of coastal wetlands in Yellow River Estuary. European Journal of Soil Biology. 2012 Mar 1;49:12-21.

Lv X, Ma B, Yu J, Chang SX, Xu J, Li Y, Wang G, Han G, Bo G, Chu X. Bacterial community structure and function shift along a successional series of tidal flats in the Yellow River Delta. Scientific reports. 2016 Nov 8;6:36550.

第十八期 ，2019年5月10日19:00, N2-146

SDU, Plant Ecology Journal Club. June 10, 2019 (Session 18th)

1. Wang Jingwen：Spatiotemporal structure of genetic variation of a spreading plant metapopulation on dynamic riverbanks along the Meuse River

2. Liu Lele：Population structure and genetic differentiation of tea green leafhopper, Empoasca (Matsumurasca) onukii, in China based on microsatellite markers

第十九期 ，2019年5月24日19:00, N2-146

SDU, Plant Ecology Journal Club. June 24, 2019 (Session 19th)

1. Liu Lele：The changes of Landscape and Ecosystem in the Nansi Lake Wetland
2. Yin Meiqi：Enhanced ROS scavenging and sugar accumulation contribute to drought tolerance of naturally occurring autotetraploids in Poncirus trifoliate
3. Wang Jingwen：Weed evolution: Genetic differentiation among wild, weedy, and crop radish

第二十期 ，2019年5月31日19:00, N2-146

SDU, Plant Ecology Journal Club. June 31, 2019 (Session 20th)

1. Liu Lele: Distinguishing recent dispersal from historical genetic connectivity in the coastal California gnatcatcher
2. Wang Jingwen: Phylogeographic diversification and postglacial range dynamics shed light on the conservation of the kelp Saccharina japonica
3. Yin Meiqi: Enhanced ROS scavenging and sugar accumulation contribute to drought tolerance of naturally occurring autotetraploids in Poncirus trifoliate (In more details)
4. Zhu Pengcheng：

第二十一期 ，2019年6月28日19:00, N2-146

SDU, Plant Ecology Journal Club. July 28, 2019 (Session 20th)

1. Liu Lele:

Guo W Y , Lambertini C , Li X Z , et al. Invasion of Old World Phragmites australis in the New World: precipitation and temperature patterns combined with human influences redesign the invasive niche[J]. Global Change Biology, 2013, 19(11):3406-3422.

2. Wang Jingwen:

Pyšek P, Skálová H, Čuda J, et al. Small genome separates native and invasive populations in an ecologically important cosmopolitan grass[J]. Ecology, 2018, 99(1): 79-90.

3. Yin Meiqi:

Pyšek P, Skálová H, Čuda J, et al. Physiology of a plant invasion: biomass production, growth and tissue chemistry of invasive and native Phragmites australis populations[J]. PRESLIA, 2019, 91(1): 51-75.

4.  Zhu Pengcheng:

Yangquanwei Zhonga, Weiming Yanb, Ruiwu Wanga, et al. Decreased occurrence of carbon cycle functions in microbial communities along with long-term secondary succession[J]. Soil Biology & Biochemistry, 2018, 123:207-217.

第二十二期，2019年7月11日19:00, N2-146

SDU, Plant Ecology Journal Club. July 11, 2019 (Session 22th)

1.Liu Lele：DNA Methylation Level in Ecology and Evolution

Alonso, C., Pérez, R., Bazaga, P., Medrano, M., Herrera, C.M., 2018. Within-plant variation in seed size and inflorescence fecundity is associated with epigenetic mosaicism in the shrub Lavandula latifolia (Lamiaceae). Ann Bot 121, 153–160. https://doi.org/10.1093/aob/mcx140
Herrera, C.M., Medrano, M., Pérez, R., Bazaga, P., Alonso, C., 2019. Within-plant heterogeneity in fecundity and herbivory induced by localized DNA hypomethylation in the perennial herb Helleborus foetidus. American Journal of Botany 106, 798–806. https://doi.org/10.1002/ajb2.1291
Alonso, C., Medrano, M., Pérez, R., Canto, A., Parra-Tabla, V., Herrera, C.M., 2019. Interspecific variation across Angiosperms in global DNA methylation: phylogeny, ecology and plant features in Tropical and Mediterranean communities. New Phytologist 0. https://doi.org/10.1111/nph.16046
2.Yin Meiqi:

Yang X, Qu Y, Yang N, et al. Litter species diversity is more important than genotypic diversity of dominant grass species Stipa grandis in influencing litter decomposition in a bare field[J]. Science of The Total Environment, 2019, 666: 490-498.

第二十三期，2019年7月19日19:00, N2-146

SDU, Plant Ecology Journal Club. July 19, 2019 (Session 23th)

1.Liu Lele: Phragmites australis in two worlds

Bhattarai, G.P., Meyerson, L.A., Cronin, J.T., 2017. Geographic variation in apparent competition between native and invasive Phragmites australis. Ecology 98, 349–358.
Guo, H.-Y., Wang, Z.-L., Huang, Z., Chen, Z., Yang, H.-B., Kang, X.-Y., 2019. Genetic Diversity and Population Structure of Alnus cremastogyne as Revealed by Microsatellite Markers. Forests 10, 278.
2.

第二十四期，2019年7月25日

SDU, Plant Ecology Journal Club. July 25, 2019 (Session 24th)

1.Liu Lele: A large‐scale epigenetic survey in Plantago lanceolata
Gáspár, B., Bossdorf, O., Durka, W., 2019. Structure, stability and ecological significance of natural epigenetic variation: a large-scale survey in Plantago lanceolata. New Phytologist 221, 1585–1596. https://doi.org/10.1111/nph.15487

2.Yin Meiqi：

Li S, Tong Y, Wang Z. Species and genetic diversity affect leaf litter decomposition in subtropical broadleaved forest in southern China[J]. Journal of Plant Ecology, 2017, 10(1): 232-241.

3.Ma Xiangyan：一个世界性物种（芦苇）在入侵期间的遗传和表观遗传变化

Liu L, Pei C, Liu S, et al. Genetic and epigenetic changes during the invasion of a cosmopolitan species (Phragmites australis)[J]. Ecology and evolution, 2018, 8(13): 6615-6624.

 
第二十五期，2019年8月2日

SDU, Plant Ecology Journal Club. August 2, 2019 (Session 25th)

1.Liu Lele:非本地植物为什么能够对生物群落产生更大的影响？
 Pearse I S , Sofaer H R , Zaya D N , et al. Non‐native plants have greater impacts because of differing per‐capita effects and nonlinear abundance–impact curves[J]. Ecology Letters, 2019, 22(8).
2.Yin Meiqi:

Lecerf A, Risnoveanu G, Popescu C, et al. Decomposition of diverse litter mixtures in streams[J]. Ecology, 2007, 88(1): 219-227.