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  • 【转载】使用python库--Graphviz为论文画出漂亮的示意图

    原文: Drawing Graphs using Dot and Graphviz

    1 License

    Copyright (C) 2013, 2014, 2015, 2016, 2017, 2018 Tony Ballantyne. Permission is granted to copy, distribute and/or modify this document under the terms of the GNU Free Documentation License, Version 1.3 or any later version published by the Free Software Foundation; with no Invariant Sections, no Front-Cover Texts, and no Back-Cover Texts.
    Code in this document is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
    This code is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

    2 Introduction

    2.1 What is DOT?

    DOT is a plain text graph description language. It is a simple way of describing graphs that both humans and computer programs can read.

    2.2 What is Graphviz?

    Graphviz is open source graph visualization software. Graph visualization is a way of representing structural information as diagrams of abstract graphs and networks.

    2.3 Who is this document for?

    This document was originally written as quick reference for myself. It was then extended to become a tutorial for Computing students. It's now offered to anyone who wants to learn DOT by example.

    You can find links to similar documents posts at my blog tech.tonyballantyne.com

    If you have stumbled across this document by accident whilst looking for my work as an SF and Fantasy writer, the following links may be more useful to you

    3 Setup

    You will need to have the Graphviz suite of programs installed on your computer to follow this tutorial. Graphiz can be downloaded for free from the Graphviz site: http://www.graphviz.org/Home.php

    4 Basic Examples

    4.1 Simple Graph

    graph graphname { 
    		a -- b; 
    		b -- c;
    		b -- d;
    		d -- a;
    	}
    

    4.2 Same Graph, Different Layout

    graph graphname {
    		rankdir=LR;  //Rank Direction Left to Right
    		a -- b; 
    		b -- c;
    		b -- d;
    		d -- a;
    	}
    

    4.3 Simple Digraph (Directional Graph)

    digraph graphname{
    		a -> b;
    		b -> c;
    		a -> c;
    	}
    

    4.4 Simple Digraph with Labels

    digraph graphname{
    
    		T [label="Teacher"]      // node T
    		P [label="Pupil"]  // node P
    
    		T->P [label="Instructions", fontcolor=darkgreen] // edge T->P
    }
    

    4.5 Same Graph, Different Shape and Colour

    digraph graphname {
    		T [label="Teacher" color=Blue, fontcolor=Red, fontsize=24, shape=box]      // node T
    		P [label="Pupil" color=Blue, fontcolor=Red, fontsize=24, shape=box]  // node P
    
    		T->P [label="Instructions", fontcolor=darkgreen] // edge T->P
    }
    

    Here are some of the shapes you can use… box, polygon, ellipse, oval, circle, point, egg, triangle, plaintext, diamond, trapezium, parallelogram, house, pentagon, hexagon, septagon, octagon, doublecircle, doubleoctagon, tripleoctagon

    There are lots more available here… http://www.graphviz.org/content/node-shapes

    4.6 Summary

    digraph summary{
    		start [label="Start with a Node"]
    		next [label="Choose your shape", shape=box]
    		warning [label="Don't go overboard", color=Blue, fontcolor=Red,fontsize=24,style=filled, fillcolor=green,shape=octagon]
    		end [label="Draw your graph!", shape=box, style=filled, fillcolor=yellow]
    
    		start->next
    		start->warning 
    		next->end [label="Getting Better...", fontcolor=darkblue]
    
    }
    

    5 More Advanced

    5.1 Saving Time

    It takes time defining each node individually. The following way is quicker

    digraph hierarchy {
    
    		nodesep=1.0 // increases the separation between nodes
    		
    		node [color=Red,fontname=Courier,shape=box] //All nodes will this shape and colour
    		edge [color=Blue, style=dashed] //All the lines look like this
    
    		Headteacher->{Deputy1 Deputy2 BusinessManager}
    		Deputy1->{Teacher1 Teacher2}
    		BusinessManager->ITManager
    		{rank=same;ITManager Teacher1 Teacher2}  // Put them on the same level
    }
    

    5.2 Records

    You can now use HTML to define these sort of blocks. Find out more at http://www.graphviz.org/doc/info/shapes.html

    digraph structs {
    	node[shape=record]
    	struct1 [label="<f0> left|<f1> mid dle|<f2> right"];
    	struct2 [label="{<f0> one|<f1> two
    
    
    }" shape=Mrecord];
    	struct3 [label="hello
    world |{ b |{c|<here> d|e}| f}| g | h"];
    	struct1:f1 -> struct2:f0;
    	struct1:f0 -> struct3:f1;
    }
    

    6 Some Example Graphs

    6.1 Finite State Machine

    digraph finite_state_machine {
    	rankdir=LR;
    	size="8,5"
    	node [shape = circle];
    	S0 -> S1 [ label = "Lift Nozzle" ]
    	S1 -> S0 [ label = "Replace Nozzle" ]
    	S1 -> S2 [ label = "Authorize Pump" ]
    	S2 -> S0 [ label = "Replace Nozzle" ]
    	S2 -> S3 [ label = "Pull Trigger" ]
    	S3 -> S2 [ label = "Release Trigger" ]
    }
    

    6.2 Data Flow Diagrams

    digraph dfd{	
    	node[shape=record]
    	store1 [label="<f0> left|<f1> Some data store"];
    	proc1 [label="{<f0> 1.0|<f1> Some process here
    
    
    }" shape=Mrecord];
    	enti1 [label="Customer" shape=box];
    	store1:f1 -> proc1:f0;
    	enti1-> proc1:f0;
    }
    

    6.3 Data Flow Diagrams 2

    The following uses subgraphs to display different levels. Note that subgraphs must start with the prefix cluster_ or they won't work. It will only work with dot layout.

    digraph dfd2{
            node[shape=record]
            subgraph level0{
            enti1 [label="Customer" shape=box];
            enti2 [label="Manager" shape=box];
            }
            subgraph cluster_level1{
                            label ="Level 1";
                            proc1 [label="{<f0> 1.0|<f1> One process here
    
    
    }" shape=Mrecord];
                            proc2 [label="{<f0> 2.0|<f1> Other process here
    
    
    }" shape=Mrecord];
                            store1 [label="<f0>    |<f1> Data store one"];
                            store2 [label="<f0>   |<f1> Data store two"];
    			{rank=same; store1, store2}
    
            }
            enti1 -> proc1
            enti2 -> proc2
            store1 -> proc1
            store2 -> proc2
    	proc1 -> store2
    	store2 -> proc1 
    }
    

    6.4 Object Inheritance

    digraph obj{
    	node[shape=record];
    	rankdir="BT";
    	
    	teacher [label = "{<f0> Teacher|<f1> 
      |<f2> 
       }"];
    	course [label = "{<f0> Course|<f1> 
      |<f2> 
       }"];
    	student [label = "{<f0> Student|<f1> 
      |<f2> 
       }"];
    	lesson [label = "{<f0> Lesson |<f1> 
      |<f2> 
       }"];
    	tutorial [label = "{<f0> Tutorial|<f1> 
      |<f2> 
       }"];
    	assessment[label = "{<f0> Assessment|<f1> 
      |<f2> 
       }"];
    	coursework [label = "{<f0> Coursework|<f1> 
      |<f2> 
       }"];
    	exam [label = "{<f0> Exam|<f1> 
      |<f2> 
       }"];
    
    	{rank=same; teacher course student}
    
    	teacher->course [dir="forward",arrowhead="none",arrowtail="normal",headlabel="1",taillabel="1.."];
    	student->course [dir="forward",arrowhead="none",arrowtail="normal",headlabel="1",taillabel="1.."];
     	lesson->course [dir="forward",arrowhead="diamond",arrowtail="normal"];
    	tutorial->course [dir="forward",arrowhead="diamond",arrowtail="normal"];
    	assessment->course [dir="forward",arrowhead="diamond",arrowtail="normal"];
    	coursework->assessment;
    	exam->assessment;
    
    }
    

    6.5 Entity Relationship

    digraph ER{
            node[shape=box];
            Book;
            Customer;
            Loan;
            {rank=same;Book,Customer,Loan}
            Book->Loan[dir="forward",arrowhead="crow",arrowtail="normal"];
            Customer->Loan[dir="forward",arrowhead="crow",arrowtail="normal"];
    }
    

    7 Reference

    Here are the most useful attributes you will need when drawing graphs. The full list can be found here: http://graphviz.org/doc/info/attrs.html

    7.1 Graph Attributes

    • label="My Graph"; Label a graph itself
    • rankdir=LR; Lay the graph out from Left to Right, instead of Top to Bottom
    • {rank=same; a, b, c } Group nodes together at the same level of a graph
    • splines="line"; Force edges to be straight, no curves or angles
    • K=0.6; Used to influence the 'spring' used in the layout, Can be used to push nodes further apart, which is especially useful for twopi and sfdp layouts

    7.2 Vertex Attributes

    • [label="Some Label"] Labels the Vertex
    • [color="red"] Colors the Vertex
    • [fillcolor="blue"] Fills the Vertex with the specified colour

    7.3 Edge Attributes

    • [label="Some Label"] Labels the Edge (Useful for Weights)
    • [color="red"] Colors the Vertex (Useful for Paths)
    • [penwidth=2.0] Adjusts the thickness of the edge line, Very useful for Paths

    7.4 Size, Background Colour

    fixedsize=true; size="1,1"; resolution=72; bgcolor="#C6CFD532";

    8 Appendices

    8.1 Further Reading

    8.2 Using Emacs Org Mode

    Emacs org mode is an ideal environment for writing, executing and exporting Dot graphics

    8.2.1 Setup

    Download and install graphviz and add the path to the exec-path variable

    You will need to update your .emacs file to load dot as a babel language. The following is a useful babel setup for dot and other languages

    (org-babel-do-load-languages
     (quote org-babel-load-languages)
     (quote ((emacs-lisp . t)
    	 (java . t)
    	 (dot . t)
    	 (ditaa . t)
    	 (R . t)
    	 (python . t)
    	 (ruby . t)
    	 (gnuplot . t)
    	 (clojure . t)
    	 (sh . t)
    	 (ledger . t)
    	 (org . t)
    	 (plantuml . t)
    	 (latex . t))))
    

    8.2.2 Embedding Dot in Emacs

    Org mode can interpret different languages by using the Library Of Babel. To do so, enclose the code in begin_ src and end_ src tags as below. You'll need to add command line arguments as shown.

    A shortcut to make a begin_ src block is to type <s [TAB]

    #+begin_src dot :file ./img/example1.png :cmdline -Kdot -Tpng
    graph graphname { 
    		a -- b; 
    		b -- c;
    		b -- d;
    		d -- a;
    	} 
    #+end_src
    

    8.2.3 The Command Line

    The section :cmdline -Kdot -Tpng in the #+begin_ src dot :file ./img/example1.png :cmdline -Kdot -Tpng section are command line arguments. They tell dot how to render and display.

    • -Kdot use dot layout. The other layouts you can try are Kneato, Kcirco, Ktwopi, Kfdp and Ksfdp for different layouts
    • -Tpng render as png

    The full command line arguments can be found here: http://graphviz.org/content/command-line-invocation

    Date: <2013-10-21 Mon>

    Author: Tony Ballantyne

    Created: 2018-09-01 Sat 12:33

    Emacs 23.3.1 (Org mode 8.0.2)

    Validate



    MARSGGBO原创





    2019-1-27



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  • 原文地址:https://www.cnblogs.com/marsggbo/p/10327618.html
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