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  • [HDOJ2457]DNA repair

    Trie图(AC自动机)+DP~

    View Code
    1 #include <cstdio>
    2 #include <cstring>
    3
    4 #define MIN(a,b) (a < b ? a : b)
    5
    6 usingnamespace std;
    7
    8 constint NS =4;
    9 constint MAXL =32;
    10 constint SIZE =1024;
    11 constchar* DNA ="ACGT";
    12
    13 int node;
    14 bool danger[SIZE];
    15 int suffix[SIZE];
    16 int next[SIZE][NS];
    17 int queue[SIZE];
    18
    19 int dp[SIZE][SIZE];
    20
    21 char description[SIZE];
    22
    23 inline int getIndex(char c)
    24 {
    25 return strchr(DNA,c) - DNA;
    26 }
    27
    28 int TrieInit()
    29 {
    30 node =0;
    31 danger[0] =false;
    32 suffix[0] =-1;
    33 memset(next[0],-1,sizeof(next[0]));
    34 return node++;
    35 }
    36
    37 void TrieInsert(char* word,int root)
    38 {
    39 char* key;
    40 int tmp;
    41
    42 key = word;
    43 tmp = root;
    44
    45 while (*key)
    46 {
    47 int idx = getIndex(*key++);
    48 if (next[tmp][idx] ==-1)
    49 {
    50 danger[node] =false;
    51 suffix[node] =-1;
    52 memset(next[node],-1,sizeof(next[node]));
    53 next[tmp][idx] = node++;
    54 }
    55 tmp = next[tmp][idx];
    56 }
    57 danger[tmp] =true;
    58 }
    59
    60 void getSuffix(int root)
    61 {
    62 int qh =-1;
    63 int qe =0;
    64
    65 queue[0] = root;
    66
    67 while (qh != qe)
    68 {
    69 qh++;
    70 int tmp = queue[qh];
    71 for (int i =0;i < NS;i++)
    72 if (next[tmp][i] !=-1)
    73 {
    74 int now = next[tmp][i];
    75 int p = suffix[tmp];
    76 while (p !=-1&& next[p][i] ==-1) p = suffix[p];
    77 if (p ==-1) suffix[now] = root;
    78 else
    79 {
    80 suffix[now] = next[p][i];
    81 danger[now] = danger[now] || danger[next[p][i]];
    82 }
    83 queue[++qe] = now;
    84 }
    85 else
    86 {
    87 int p = suffix[tmp];
    88 while (p !=-1&& next[p][i] ==-1) p = suffix[p];
    89 if (p ==-1) next[tmp][i] = root;
    90 else next[tmp][i] = next[p][i];
    91 }
    92 }
    93 }
    94
    95 int main ()
    96 {
    97 int n;
    98 char word[MAXL];
    99
    100 for(int cc =1;scanf("%d",&n) ==1&& n;cc++)
    101 {
    102 int root = TrieInit();
    103 for (int i =0;i < n;i++)
    104 {
    105 scanf("%s",word);
    106 TrieInsert(word,root);
    107 }
    108
    109 getSuffix(root);
    110
    111 scanf("%s",description);
    112
    113 int len = strlen(description);
    114
    115 for (int i =0;i <= len;i++)
    116 for (int j =0;j < node;j++)
    117 dp[i][j] = SIZE;
    118 dp[0][0] =0;
    119
    120 for (int i =1;i <= len;i++)
    121 for (int j =0;j < node;j++)
    122 if (!danger[j])
    123 for (int k =0;k < NS;k++)
    124 if (!danger[next[j][k]])
    125 dp[i][next[j][k]] = MIN(dp[i][next[j][k]],dp[i-1][j] + (getIndex(description[i-1]) == k ?0 : 1));
    126 int ans = SIZE;
    127 for (int i =0;i < node;i++)
    128 if (!danger[i] && ans > dp[len][i])
    129 ans = dp[len][i];
    130
    131 printf("Case %d: %d\n",cc,ans == SIZE ?-1 : ans);
    132 }
    133 return0;
    134 }
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  • 原文地址:https://www.cnblogs.com/debugcool/p/HDOJ2457.html
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